Universal Descriptors of 'Quasi Transition States' for Small-Data-Driven Asymmetric Catalysis Prediction in Machine Learning Model

01 March 2024, Version 2
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

In contemporary enantioselectivity prediction models, the demand for numerous descriptors and extensive datasets poses a substantial challenge. Descriptor selection, fraught with uncertainty, compounds the issue while amassing requisite data remains a daunting task. The introduction of descriptors derived from quasi-transition-states (qTS) offers a promising avenue to alleviate this burden. However, the challenge of descriptor selection persists. Herein, a novel small-data-driven model based on universal descriptors (UD-qTS) is proposed. Key differentiating properties between diastereomeric qTSs, encompassing energies, frontier orbital energies, Cartesian forces and charges of core atoms, are proposed as UD. The model's efficacy is validated through its application to the asymmetric aldol reaction, utilizing 3 experimental variables and merely 9 UDs, and fewer than 150 training samples. Moreover, a novel method is presented using Cartesian forces to rectify discrepancies between qTS and true TS. This UD-qTS strategy circumvents tedious large-scale descriptor exploration and screening, offering an efficient choice for small-data-driven enantioselectivity prediction.

Keywords

Enantioselectivity prediction
Neural network
Descriptor
Quasi transition state
Cartesian force
Aldol reaction

Supplementary materials

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Description
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Document S1
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Supplementary information, Table S1–S2, and Figures S1–S4
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Data S1
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Collected reactions(SMILES)
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Data S2
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M06 descriptors and results
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Data S3
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PM6 descriptors and results
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Data S4
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Low to high ee
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